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Mass Spectrometry 1: Sample Preparation Virtual Lab

Mass Spectrometry 1: Sample Preparation

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You will assist in a biopsy on a cancer patient and learn how to prepare the sample for mass spectrometry by extracting its phosphopeptides. Will you be able to identify the cancer stage of the patient by looking at the phosphorylation pattern?

About the Mass Spectrometry 1: Sample Preparation Virtual Simulation Lab

The MS Sample Preparation simulation is the first simulation in the Mass Spectrometry series. Here, you will assist in a biopsy on a cancer patient and learn how to prepare the sample for mass spectrometry by extracting its phosphopeptides. Will you be able to identify the cancer stage of the patient by looking at the phosphorylation pattern?

Techniques In Lab

  • Cell lysis
  • Protein purification
  • Enzymatic digestion
  • Phosphopeptide enrichment

Learning Objectives

  • Understanding the correlation between phosphorylation and cancer
  • Learning how to prepare a biopsy sample for mass spectromerty

Screenshots of Mass Spectrometry 1: Sample Preparation Virtual Simulation Lab

Collaborators

Dr. James Longden

Dr. James Longden

Biotech Research and Innovation Centre

University of Copenhagen

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